SNU Compbio Lab
Publications
Total 105 posts.-
Atomic-level thermodynamics analysis of the binding free energy of SARS-CoV-2 neutralizing antibodies
Jihyeon Lee, Chaok Seok, Sihyun Ham and Song-Ho Chong*
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Evaluating GPCR modeling and docking strategies in the era of deep learning-based protein structure prediction
Sumin Lee, Seeun Kim, Gyu Rie Lee, Sohee Kwon, Hyeonuk Woo, Chaok Seok* and Hahnbeom Park*
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CSAlign and CSAlign-Dock: Structure alignment of ligands considering full flexibility and application to protein-ligand docking
Sohee Kwon and Chaok Seok*
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HProteome-BSite: predicted binding sites and ligands in human 3D proteome
Jiho Sim, Sohee Kwon and Chaok Seok*
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GalaxyWater-CNN: Prediction of Water Positions on the Protein Structure by a 3D-Convolutional Neural Network
Sangwoo Park and Chaok Seok*
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GalaxyDomDock: An ab initio domain–domain docking web server for multi-domain protein structure prediction
Jayun Choi, Taeyong Park, Seung Yul Lee, Jinsol Yang and Chaok Seok*
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Cryo-EM structure of the human somatostatin receptor 2 complex with its agonist somatostatin delineates the ligand-binding specificity
Yunseok Heo et al. (Hyeonuk Woo)
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A pGpG-specific phosphodiesterase regulates cyclic di-GMP signaling in Vibrio cholerae
Kyoo Heo et al. (Sohee Kwon and Chaok Seok)
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Structural basis of neuropeptide Y signaling through Y1 receptor
Chaehee Park et al. (Hyeonuk Woo and Chaok Seok)
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A benchmark study of machine learning methods for molecular electronic transition: Tree-based ensemble learning versus graph neural network
Beomchang Kang, Chaok Seok* and Juyong Lee*